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SRX033207: Whole Exome sequencing for the 1000 Genomes Project
120 ILLUMINA (Illumina HiSeq 2000) runs: 103.5M spots, 14.9G bases, 8.4Gb downloads

Design: Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection
Submitted by: Broad Institute (BI)
Study: Exome sequencing of (CLM) Colombia from Medellin, Colombia HapMap population
PRJNA60133 • SRP004070 • All experiments • All runs
Samples: pool of 15 samples • Homo sapiens
Library:
Name: Solexa-44770
Instrument: Illumina HiSeq 2000
Strategy: WXS
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Spot descriptor:
1  forward barcode77  reverse

Experiment attributes: (show all 6 attributes...) (hide...)
EXPECTED_BASECALL_TABLE: match_edge="full" max_mismatch="1" min_match="7" r (show full text...)(hide...)
match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_934" member_name="tagged_934_TTAATCAG" TTAATCAG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_534" member_name="tagged_534_CTGCGGAT" CTGCGGAT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_635" member_name="tagged_635_GCAGCCGT" GCAGCCGT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_293" member_name="tagged_293_ATTCTAGG" ATTCTAGG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_289" member_name="tagged_289_ATTATGTT" ATTATGTT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_800" member_name="tagged_800_TACTTAGC" TACTTAGC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_220" member_name="tagged_220_AGGTCGCA" AGGTCGCA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_924" member_name="tagged_924_TGTAATCA" TGTAATCA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_422" member_name="tagged_422_CCTACCAT" CCTACCAT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_747" member_name="tagged_747_GTCCACAG" GTCCACAG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_938" member_name="tagged_938_TTACGCAC" TTACGCAC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_509" member_name="tagged_509_CTATGCGT" CTATGCGT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_288" member_name="tagged_288_ATTATCAA" ATTATCAA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_754" member_name="tagged_754_GTCTGATG" GTCTGATG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_498" member_name="tagged_498_CGTTACCA" CGTTACCA
5 BI attributes: (show...)(hide...)
BI GSSR sample IDs: 65652.0, 65653.0, 65654.0, 65655.0, 65656.0, 65657.0, 65658.0, 65659.0, 65660.0, 65661.0, 65662.0, 65663.0, 65664.0, 65665.0, 65666.0
BI GSSR sample LSIDs: broadinstitute.org:bsp.prod.sample:1D9W7, broadinstitute.org:bsp.prod.sample:1D9W8, broadinstitute.org:bsp.prod.sample:1D9W9, broadinstitute.org:bsp.prod.sample:1D9WA, broadinstitute.org:bsp.prod.sample:1D9WB, broadinstitute.org:bsp.prod.sample:1D9WC, broadinstitute.org:bsp.prod.sample:1D9WD, broadinstitute.org:bsp.prod.sample:1D9WE, broadinstitute.org:bsp.prod.sample:1D9WF, broadinstitute.org:bsp.prod.sample:1D9WG, broadinstitute.org:bsp.prod.sample:1D9WH, broadinstitute.org:bsp.prod.sample:1D9WI, broadinstitute.org:bsp.prod.sample:1D9WJ, broadinstitute.org:bsp.prod.sample:1D9WK, broadinstitute.org:bsp.prod.sample:1D9WL
BI project name: C460
BI target set: whole_exome_agilent_1.1_refseq_plus_3_boosters
BI work request ID: 23276
Runs: 120 runs, 103.5M spots, 14.9G bases, 8.4Gb
Run# of Spots# of BasesSizePublished
SRR079825917,883132.2M76Mb2010-12-14
SRR079826830,603119.6M69.7Mb2010-12-14
SRR079828889,637128.1M73.7Mb2010-12-14
SRR079829864,803124.5M72Mb2010-12-14
SRR079830864,487124.5M71.9Mb2010-12-14
SRR0798311,024,175147.5M87.1Mb2010-12-14
SRR079832950,878136.9M78.9Mb2010-12-14
SRR079833806,695116.2M67.2Mb2010-12-14
SRR079834952,850137.2M81Mb2010-12-14
SRR079835823,047118.5M68.4Mb2010-12-14
SRR079836926,616133.4M77.5Mb2010-12-14
SRR079837857,243123.4M72.4Mb2010-12-14
SRR079838852,065122.7M70.3Mb2010-12-14
SRR079839800,376115.3M67Mb2010-12-14
SRR079840984,916141.8M82.7Mb2010-12-14
There are 105 omitted runs. See all runs in Run Selector.

#Member# of Spots# of Bases
1SRS074262 : tagged_293_ATTCTAGG7.6M1.1G
2SRS074263 : tagged_747_GTCCACAG6.4M925.6M
3SRS074271 : tagged_938_TTACGCAC6.5M935.3M
4SRS074283 : tagged_220_AGGTCGCA7.7M1.1G
5SRS074284 : tagged_924_TGTAATCA6.4M926.3M
6SRS074286 : tagged_934_TTAATCAG5.9M851.8M
7SRS074287 : tagged_498_CGTTACCA6.9M998.5M
8SRS074292 : tagged_800_TACTTAGC6.6M957.6M
9SRS074293 : tagged_534_CTGCGGAT6.9M988.5M
10SRS074295 : tagged_422_CCTACCAT7.3M1G
11SRS074296 : tagged_289_ATTATGTT6.8M978.6M
12SRS074298 : tagged_754_GTCTGATG6.1M885.1M
13SRS074299 : tagged_288_ATTATCAA7.3M1.1G
14SRS074301 : tagged_509_CTATGCGT6.9M997.5M
15SRS074302 : tagged_635_GCAGCCGT8M1.2G
16 : defaultn/an/a

ID:
40151

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